Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
XRN1Q8IZH2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
XRN1Q8IZH2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 PAUPAR-201ENST00000630360 2965 ntBASIC19.44■□□□□ 0.7
XRN1Q8IZH2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 AIG1-203ENST00000367596 559 ntTSL 2 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 RPL14-203ENST00000416518 812 ntTSL 3 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 MAGEA7P-201ENST00000436482 942 ntBASIC19.44■□□□□ 0.7
XRN1Q8IZH2 RPSAP70-201ENST00000504462 864 ntBASIC19.44■□□□□ 0.7
XRN1Q8IZH2 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 MIR4326-201ENST00000582203 59 ntBASIC19.44■□□□□ 0.7
XRN1Q8IZH2 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRN1Q8IZH2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 AL773545.2-201ENST00000442149 472 ntBASIC19.43■□□□□ 0.7
XRN1Q8IZH2 LY6E-215ENST00000523847 427 ntTSL 3 BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 AC048382.6-201ENST00000621980 1223 ntBASIC19.43■□□□□ 0.7
XRN1Q8IZH2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 AC103702.1-201ENST00000548801 2630 ntBASIC19.43■□□□□ 0.7
XRN1Q8IZH2 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRN1Q8IZH2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 AC010086.2-201ENST00000428616 226 ntBASIC19.42■□□□□ 0.7
XRN1Q8IZH2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 RHOQP2-201ENST00000449922 579 ntBASIC19.42■□□□□ 0.7
XRN1Q8IZH2 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 LINC00554-201ENST00000564841 3011 ntBASIC19.42■□□□□ 0.7
XRN1Q8IZH2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 SNRPD2P2-201ENST00000473818 333 ntBASIC19.42■□□□□ 0.7
XRN1Q8IZH2 AC099328.1-201ENST00000498809 1030 ntBASIC19.42■□□□□ 0.7
XRN1Q8IZH2 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 CCND3P2-201ENST00000579393 537 ntBASIC19.42■□□□□ 0.7
XRN1Q8IZH2 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
XRN1Q8IZH2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRN1Q8IZH2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms