Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 MIR193BHG-211ENST00000641433 5365 ntBASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM48Q8IWZ4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AJ011931.1-201ENST00000618749 2492 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 C8orf49-201ENST00000525043 1968 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 FNTAP2-201ENST00000430308 634 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 CICP12-201ENST00000455801 843 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AC013355.1-201ENST00000562625 723 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AC008805.1-201ENST00000590892 364 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 MIR6720-201ENST00000611664 98 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AC004923.1-202ENST00000642106 209 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AC004899.1-201ENST00000424687 1714 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 AL008718.2-201ENST00000609206 1313 ntBASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM48Q8IWZ4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 AC244394.1-201ENST00000435000 1665 ntBASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms