Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 AC090505.1-201ENST00000430515 1834 ntBASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC60Q8IWA6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.08■□□□□ 0.17
CCDC60Q8IWA6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 RPSAP15-201ENST00000448168 861 ntBASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 AC128714.1-201ENST00000637035 887 ntBASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC60Q8IWA6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC60Q8IWA6 MIR557-201ENST00000385239 98 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms