Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 AL157407.1-201ENST00000435784 904 ntBASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.67□□□□□ -0.06
LYSMD3Q7Z3D4 TMBIM7P-202ENST00000641474 1516 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AC011498.7-201ENST00000624986 2027 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AC021723.1-201ENST00000486306 515 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 SORD2P-201ENST00000558556 1069 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AC027237.1-201ENST00000560942 655 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 Z98259.2-201ENST00000641583 609 ntBASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LYSMD3Q7Z3D4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms