Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 MSTO2P-201ENST00000314835 1709 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AC011840.2-201ENST00000563063 1520 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 PTPRVP-205ENST00000641549 5067 ntBASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HIST3H2AQ7L7L0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 CICP17-201ENST00000418553 2377 ntBASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
HIST3H2AQ7L7L0 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HIST3H2AQ7L7L0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms