Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC19■□□□□ 0.63
USP31Q70CQ4 SURF4-203ENST00000371991 715 ntTSL 3 BASIC19■□□□□ 0.63
USP31Q70CQ4 OR2W2P-201ENST00000406313 909 ntBASIC19■□□□□ 0.63
USP31Q70CQ4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP31Q70CQ4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
USP31Q70CQ4 KRT17P4-201ENST00000429445 819 ntBASIC19■□□□□ 0.63
USP31Q70CQ4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP31Q70CQ4 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 CD81-209ENST00000492627 886 ntTSL 3 BASIC19■□□□□ 0.63
USP31Q70CQ4 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC19■□□□□ 0.63
USP31Q70CQ4 AC093300.1-201ENST00000510368 1201 ntBASIC19■□□□□ 0.63
USP31Q70CQ4 FAM86B3P-203ENST00000523992 854 ntBASIC19■□□□□ 0.63
USP31Q70CQ4 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 CYP4F36P-201ENST00000589193 186 ntBASIC19■□□□□ 0.63
USP31Q70CQ4 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC19■□□□□ 0.63
USP31Q70CQ4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP31Q70CQ4 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP31Q70CQ4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19■□□□□ 0.63
USP31Q70CQ4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC19■□□□□ 0.63
USP31Q70CQ4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP31Q70CQ4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP31Q70CQ4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 AC015909.5-201ENST00000624336 2266 ntBASIC18.99■□□□□ 0.63
USP31Q70CQ4 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 AC068760.1-201ENST00000493579 1953 ntBASIC18.99■□□□□ 0.63
USP31Q70CQ4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 BPIFB5P-201ENST00000457066 1099 ntBASIC18.99■□□□□ 0.63
USP31Q70CQ4 AC008026.2-201ENST00000495438 348 ntBASIC18.99■□□□□ 0.63
USP31Q70CQ4 COQ10BP2-201ENST00000513804 724 ntBASIC18.99■□□□□ 0.63
USP31Q70CQ4 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 TREHP1-201ENST00000531328 465 ntBASIC18.99■□□□□ 0.63
USP31Q70CQ4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 CES1P2-201ENST00000566467 1242 ntBASIC18.99■□□□□ 0.63
USP31Q70CQ4 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 AL390755.1-201ENST00000623716 2027 ntBASIC18.99■□□□□ 0.63
USP31Q70CQ4 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
USP31Q70CQ4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USP31Q70CQ4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 HSPA8P5-201ENST00000456928 2069 ntBASIC18.98■□□□□ 0.63
USP31Q70CQ4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 AC144831.1-201ENST00000573312 2656 ntBASIC18.98■□□□□ 0.63
USP31Q70CQ4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 AL139158.3-201ENST00000641212 1562 ntBASIC18.98■□□□□ 0.63
USP31Q70CQ4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
USP31Q70CQ4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP31Q70CQ4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP31Q70CQ4 AL365181.1-201ENST00000564032 1828 ntBASIC18.97■□□□□ 0.63
USP31Q70CQ4 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP31Q70CQ4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP31Q70CQ4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms