Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC149Q6ZUS6 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC149Q6ZUS6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC149Q6ZUS6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC149Q6ZUS6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC149Q6ZUS6 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC149Q6ZUS6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 ORAOV1P1-201ENST00000503108 395 ntBASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 KRT8P1-201ENST00000557533 1207 ntBASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 AC021016.3-201ENST00000608367 477 ntBASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 AC105137.3-201ENST00000617588 984 ntBASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 AC127024.7-201ENST00000625101 200 ntBASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC149Q6ZUS6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 KRT17P5-201ENST00000332088 839 ntBASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 HIST2H2BA-201ENST00000412169 381 ntBASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AC092638.2-201ENST00000441105 947 ntBASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 LYPLA2P1-203ENST00000447689 696 ntBASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AC025262.2-201ENST00000623975 1056 ntBASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 AC018442.1-201ENST00000421439 2061 ntBASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms