Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SHISA2Q6UWI4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 CASC19-229ENST00000641418 1373 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 PTENP1-202ENST00000532280 3996 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 RN7SKP230-201ENST00000365642 335 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 TLE1P1-201ENST00000422965 589 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 FTH1P22-201ENST00000456305 520 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ORAOV1P1-201ENST00000503108 395 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AC084752.1-201ENST00000509766 622 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 DNM1P51-201ENST00000558149 522 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 MIR3180-2-201ENST00000581748 88 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AC011247.3-201ENST00000603297 438 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AC009560.1-201ENST00000620208 434 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 AC005618.3-201ENST00000624928 458 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 CICP8-201ENST00000455800 2813 ntBASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SHISA2Q6UWI4 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms