Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTR9Q6PD62 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 AHCYP4-201ENST00000419201 1315 ntBASIC17.27■□□□□ 0.36
CTR9Q6PD62 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 AC124068.2-201ENST00000569473 1109 ntBASIC17.27■□□□□ 0.36
CTR9Q6PD62 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTR9Q6PD62 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTR9Q6PD62 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.27■□□□□ 0.35
CTR9Q6PD62 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CTR9Q6PD62 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTR9Q6PD62 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 AC005252.3-201ENST00000623855 2258 ntBASIC17.26■□□□□ 0.35
CTR9Q6PD62 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 NUP210P1-202ENST00000504322 710 ntBASIC17.26■□□□□ 0.35
CTR9Q6PD62 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 PCDHA3-202ENST00000532566 4594 ntBASIC17.26■□□□□ 0.35
CTR9Q6PD62 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTR9Q6PD62 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTR9Q6PD62 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTR9Q6PD62 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.25■□□□□ 0.35
CTR9Q6PD62 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTR9Q6PD62 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.25■□□□□ 0.35
CTR9Q6PD62 AC097359.2-201ENST00000604992 2389 ntBASIC17.25■□□□□ 0.35
CTR9Q6PD62 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTR9Q6PD62 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTR9Q6PD62 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms