Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.92■□□□□ 0.46
RC3H1Q5TC82 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 AC023906.1-201ENST00000486386 453 ntBASIC17.92■□□□□ 0.46
RC3H1Q5TC82 RN7SL147P-201ENST00000487345 298 ntBASIC17.92■□□□□ 0.46
RC3H1Q5TC82 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC17.92■□□□□ 0.46
RC3H1Q5TC82 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC17.92■□□□□ 0.46
RC3H1Q5TC82 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RC3H1Q5TC82 AC007950.2-201ENST00000615045 2347 ntBASIC17.92■□□□□ 0.46
RC3H1Q5TC82 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 ABCD1P4-201ENST00000399687 604 ntBASIC17.91■□□□□ 0.46
RC3H1Q5TC82 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 TYMSP2-201ENST00000589501 424 ntBASIC17.91■□□□□ 0.46
RC3H1Q5TC82 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RC3H1Q5TC82 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 OR10N1P-201ENST00000392758 869 ntBASIC17.9■□□□□ 0.46
RC3H1Q5TC82 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.9■□□□□ 0.46
RC3H1Q5TC82 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms