Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 KRT8P43-201ENST00000406052 1458 ntBASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 AL137077.2-201ENST00000635124 1608 ntBASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 MIR611-201ENST00000384869 67 ntBASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 RPSAP12-201ENST00000435879 888 ntBASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 AL356000.1-201ENST00000441073 1238 ntBASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 AC133141.1-201ENST00000443015 339 ntBASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 RN7SL173P-201ENST00000461853 292 ntBASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C9orf50Q5SZB4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 SHMT1P1-201ENST00000419974 1312 ntBASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 TBC1D27-202ENST00000424239 1573 ntBASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 AIG1-203ENST00000367596 559 ntTSL 2 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 JPT2-203ENST00000382711 894 ntTSL 4 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 OR2W2P-201ENST00000406313 909 ntBASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 B9D1-206ENST00000461069 923 ntTSL 2 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 SNRPD2P2-201ENST00000473818 333 ntBASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 MIR6893-201ENST00000613458 69 ntBASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 AC113385.2-201ENST00000614465 762 ntBASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C9orf50Q5SZB4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
C9orf50Q5SZB4 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
C9orf50Q5SZB4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
C9orf50Q5SZB4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
C9orf50Q5SZB4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
C9orf50Q5SZB4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC15.2■□□□□ 0.02
C9orf50Q5SZB4 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms