Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 AC131206.1-201ENST00000538078 1211 ntBASIC13.33□□□□□ -0.28
RBM48Q5RL73 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 AC004461.2-201ENST00000629517 803 ntBASIC13.33□□□□□ -0.28
RBM48Q5RL73 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 AC115284.2-201ENST00000624646 2054 ntBASIC13.33□□□□□ -0.28
RBM48Q5RL73 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 GHET1-201ENST00000627071 1906 ntBASIC13.33□□□□□ -0.28
RBM48Q5RL73 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
RBM48Q5RL73 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RBM48Q5RL73 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 AL928654.5-201ENST00000624831 2501 ntBASIC13.32□□□□□ -0.28
RBM48Q5RL73 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 NUS1P3-201ENST00000423502 862 ntBASIC13.32□□□□□ -0.28
RBM48Q5RL73 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 AC027601.4-201ENST00000611259 610 ntBASIC13.32□□□□□ -0.28
RBM48Q5RL73 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RBM48Q5RL73 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.32□□□□□ -0.28
RBM48Q5RL73 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RBM48Q5RL73 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RBM48Q5RL73 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RBM48Q5RL73 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RBM48Q5RL73 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RBM48Q5RL73 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RBM48Q5RL73 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.31□□□□□ -0.28
RBM48Q5RL73 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.31□□□□□ -0.28
RBM48Q5RL73 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RBM48Q5RL73 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms