Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSR1Q2NL82 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.13■□□□□ 0.17
TSR1Q2NL82 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 AL512638.1-201ENST00000457493 794 ntBASIC16.12■□□□□ 0.17
TSR1Q2NL82 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 AL390955.2-201ENST00000603032 514 ntBASIC16.12■□□□□ 0.17
TSR1Q2NL82 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC16.12■□□□□ 0.17
TSR1Q2NL82 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 LRRC59-203ENST00000576448 1531 ntBASIC16.12■□□□□ 0.17
TSR1Q2NL82 AC130686.1-201ENST00000622936 2466 ntBASIC16.12■□□□□ 0.17
TSR1Q2NL82 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSR1Q2NL82 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.12■□□□□ 0.17
TSR1Q2NL82 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 TMEM198B-204ENST00000484016 896 ntBASIC16.11■□□□□ 0.17
TSR1Q2NL82 GIMAP3P-201ENST00000495150 836 ntBASIC16.11■□□□□ 0.17
TSR1Q2NL82 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 AC104596.2-201ENST00000512793 793 ntBASIC16.11■□□□□ 0.17
TSR1Q2NL82 AP001582.1-201ENST00000525856 295 ntBASIC16.11■□□□□ 0.17
TSR1Q2NL82 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 AC009407.1-201ENST00000568958 598 ntBASIC16.11■□□□□ 0.17
TSR1Q2NL82 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 AC108673.2-201ENST00000608909 565 ntBASIC16.11■□□□□ 0.17
TSR1Q2NL82 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 KRT8P35-201ENST00000483942 1338 ntBASIC16.11■□□□□ 0.17
TSR1Q2NL82 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.11■□□□□ 0.17
TSR1Q2NL82 CICP17-201ENST00000418553 2377 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms