Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP1Q04837 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
SSBP1Q04837 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SSBP1Q04837 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP1Q04837 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SSBP1Q04837 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.34□□□□□ -0.43
SSBP1Q04837 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
SSBP1Q04837 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 AC114501.2-201ENST00000439631 535 ntBASIC12.34□□□□□ -0.43
SSBP1Q04837 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 FAM86LP-201ENST00000478302 853 ntBASIC12.34□□□□□ -0.43
SSBP1Q04837 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.34□□□□□ -0.43
SSBP1Q04837 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.34□□□□□ -0.43
SSBP1Q04837 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 AC092865.5-201ENST00000545435 363 ntBASIC12.34□□□□□ -0.43
SSBP1Q04837 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
SSBP1Q04837 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.34□□□□□ -0.43
SSBP1Q04837 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 AC004835.2-201ENST00000603762 682 ntBASIC12.34□□□□□ -0.43
SSBP1Q04837 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.34□□□□□ -0.43
SSBP1Q04837 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 AC087499.5-201ENST00000452760 1342 ntBASIC12.34□□□□□ -0.43
SSBP1Q04837 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 MSNP1-201ENST00000511640 1732 ntBASIC12.34□□□□□ -0.43
SSBP1Q04837 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SSBP1Q04837 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SSBP1Q04837 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.34□□□□□ -0.43
SSBP1Q04837 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SSBP1Q04837 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.33□□□□□ -0.44
SSBP1Q04837 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.33□□□□□ -0.44
SSBP1Q04837 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 MIR1224-201ENST00000408193 85 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.33□□□□□ -0.44
SSBP1Q04837 AL590627.1-203ENST00000421194 1026 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
SSBP1Q04837 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 EIF3FP3-201ENST00000434851 1086 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SSBP1Q04837 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.33□□□□□ -0.44
SSBP1Q04837 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.33□□□□□ -0.44
SSBP1Q04837 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 SLC25A1P1-201ENST00000528351 927 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 AC044860.1-202ENST00000559481 777 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms