Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
SRPXP78539 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.06□□□□□ -0.48
SRPXP78539 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 AL139400.1-201ENST00000366220 510 ntBASIC12.06□□□□□ -0.48
SRPXP78539 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.06□□□□□ -0.48
SRPXP78539 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.06□□□□□ -0.48
SRPXP78539 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.06□□□□□ -0.48
SRPXP78539 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.06□□□□□ -0.48
SRPXP78539 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.06□□□□□ -0.48
SRPXP78539 AL391069.4-201ENST00000609583 481 ntBASIC12.06□□□□□ -0.48
SRPXP78539 AC007431.3-201ENST00000623221 587 ntBASIC12.06□□□□□ -0.48
SRPXP78539 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 BTBD7P1-201ENST00000447253 1453 ntBASIC12.06□□□□□ -0.48
SRPXP78539 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SRPXP78539 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SRPXP78539 AC064801.2-201ENST00000625052 1303 ntBASIC12.06□□□□□ -0.48
SRPXP78539 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SRPXP78539 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SRPXP78539 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.05□□□□□ -0.48
SRPXP78539 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.05□□□□□ -0.48
SRPXP78539 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
SRPXP78539 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.05□□□□□ -0.48
SRPXP78539 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
SRPXP78539 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.05□□□□□ -0.48
SRPXP78539 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.05□□□□□ -0.48
SRPXP78539 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SRPXP78539 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SRPXP78539 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.05□□□□□ -0.48
SRPXP78539 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.05□□□□□ -0.48
SRPXP78539 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SRPXP78539 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 CNN2P2-201ENST00000443536 909 ntBASIC12.05□□□□□ -0.48
SRPXP78539 CNN2P3-201ENST00000450201 906 ntBASIC12.05□□□□□ -0.48
SRPXP78539 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.05□□□□□ -0.48
SRPXP78539 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.05□□□□□ -0.48
SRPXP78539 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.05□□□□□ -0.48
SRPXP78539 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.05□□□□□ -0.48
SRPXP78539 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.05□□□□□ -0.48
SRPXP78539 AL136317.3-201ENST00000618497 906 ntBASIC12.05□□□□□ -0.48
SRPXP78539 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.05□□□□□ -0.48
SRPXP78539 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SRPXP78539 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.05□□□□□ -0.48
SRPXP78539 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.05□□□□□ -0.48
SRPXP78539 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 MAPK10-262ENST00000641051 5738 ntBASIC12.05□□□□□ -0.48
SRPXP78539 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 AL138725.1-201ENST00000407347 1314 ntBASIC12.05□□□□□ -0.48
SRPXP78539 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SRPXP78539 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms