Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TUBB8P4-201ENST00000511806 1324 ntBASIC16.42■□□□□ 0.22
TPM4P67936 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM4P67936 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM4P67936 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TPM4P67936 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM4P67936 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM4P67936 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TPM4P67936 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TPM4P67936 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TPM4P67936 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM4P67936 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM4P67936 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TPM4P67936 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 RNU1-114P-201ENST00000365297 166 ntBASIC16.41■□□□□ 0.22
TPM4P67936 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM4P67936 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TPM4P67936 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 AP001582.1-201ENST00000525856 295 ntBASIC16.41■□□□□ 0.22
TPM4P67936 AC135586.1-201ENST00000539323 574 ntBASIC16.41■□□□□ 0.22
TPM4P67936 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 AC004449.1-201ENST00000564240 433 ntBASIC16.41■□□□□ 0.22
TPM4P67936 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM4P67936 AL662799.1-202ENST00000614205 422 ntBASIC16.41■□□□□ 0.22
TPM4P67936 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM4P67936 AL591122.2-201ENST00000624125 1853 ntBASIC16.41■□□□□ 0.22
TPM4P67936 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TPM4P67936 AL805961.2-201ENST00000642139 4817 ntBASIC16.41■□□□□ 0.22
TPM4P67936 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM4P67936 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TPM4P67936 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TPM4P67936 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM4P67936 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM4P67936 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TPM4P67936 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TPM4P67936 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TPM4P67936 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM4P67936 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM4P67936 AC134915.1-201ENST00000426461 574 ntBASIC16.4■□□□□ 0.22
TPM4P67936 AC092580.3-201ENST00000430932 139 ntBASIC16.4■□□□□ 0.22
TPM4P67936 AC241585.1-201ENST00000433527 519 ntBASIC16.4■□□□□ 0.22
TPM4P67936 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TPM4P67936 AL589987.1-201ENST00000453380 819 ntBASIC16.4■□□□□ 0.22
TPM4P67936 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM4P67936 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM4P67936 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM4P67936 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.4■□□□□ 0.22
TPM4P67936 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
TPM4P67936 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM4P67936 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.4■□□□□ 0.22
TPM4P67936 SPDYE22P-201ENST00000582158 798 ntBASIC16.4■□□□□ 0.22
TPM4P67936 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.4■□□□□ 0.22
TPM4P67936 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM4P67936 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM4P67936 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 AC004899.2-201ENST00000622993 3860 ntBASIC16.4■□□□□ 0.22
TPM4P67936 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM4P67936 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TPM4P67936 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TPM4P67936 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM4P67936 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM4P67936 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms