Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC42P60953 AC027369.6-201ENST00000525520 931 ntBASIC13.39□□□□□ -0.27
CDC42P60953 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.39□□□□□ -0.27
CDC42P60953 SORD2P-201ENST00000558556 1069 ntBASIC13.39□□□□□ -0.27
CDC42P60953 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC42P60953 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDC42P60953 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDC42P60953 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC42P60953 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDC42P60953 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC42P60953 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CDC42P60953 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 KHSRPP1-201ENST00000427983 1768 ntBASIC13.38□□□□□ -0.27
CDC42P60953 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42P60953 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.38□□□□□ -0.27
CDC42P60953 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 AC211486.1-202ENST00000416371 468 ntBASIC13.38□□□□□ -0.27
CDC42P60953 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42P60953 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.38□□□□□ -0.27
CDC42P60953 VDAC1P7-201ENST00000462417 847 ntBASIC13.38□□□□□ -0.27
CDC42P60953 AC112482.1-201ENST00000492080 688 ntBASIC13.38□□□□□ -0.27
CDC42P60953 AC211476.1-201ENST00000503899 468 ntBASIC13.38□□□□□ -0.27
CDC42P60953 AC069120.2-201ENST00000524091 540 ntBASIC13.38□□□□□ -0.27
CDC42P60953 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42P60953 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.38□□□□□ -0.27
CDC42P60953 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42P60953 AC010327.4-202ENST00000591484 748 ntBASIC13.38□□□□□ -0.27
CDC42P60953 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42P60953 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42P60953 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 NCLP1-201ENST00000445357 1963 ntBASIC13.38□□□□□ -0.27
CDC42P60953 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC42P60953 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC42P60953 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC42P60953 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CDC42P60953 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDC42P60953 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC42P60953 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42P60953 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDC42P60953 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC42P60953 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC42P60953 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC42P60953 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms