Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 AC092364.2-202ENST00000597012 1073 ntBASIC12.79□□□□□ -0.36
DEFA1P59665 AC009955.4-201ENST00000597192 544 ntBASIC12.79□□□□□ -0.36
DEFA1P59665 AC025062.2-201ENST00000605477 670 ntBASIC12.79□□□□□ -0.36
DEFA1P59665 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.79□□□□□ -0.36
DEFA1P59665 AL161645.1-201ENST00000622716 1255 ntBASIC12.79□□□□□ -0.36
DEFA1P59665 AC004790.2-201ENST00000623588 572 ntBASIC12.79□□□□□ -0.36
DEFA1P59665 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
DEFA1P59665 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
DEFA1P59665 PCDHB17P-202ENST00000623466 3066 ntBASIC12.79□□□□□ -0.36
DEFA1P59665 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
DEFA1P59665 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA1P59665 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
DEFA1P59665 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 TSPY19P-201ENST00000418461 509 ntBASIC12.78□□□□□ -0.36
DEFA1P59665 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.78□□□□□ -0.36
DEFA1P59665 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 TSPY18P-201ENST00000441642 509 ntBASIC12.78□□□□□ -0.36
DEFA1P59665 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.78□□□□□ -0.36
DEFA1P59665 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.78□□□□□ -0.36
DEFA1P59665 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.78□□□□□ -0.36
DEFA1P59665 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.78□□□□□ -0.36
DEFA1P59665 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.78□□□□□ -0.36
DEFA1P59665 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.78□□□□□ -0.36
DEFA1P59665 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.78□□□□□ -0.36
DEFA1P59665 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.78□□□□□ -0.36
DEFA1P59665 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA1P59665 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA1P59665 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DEFA1P59665 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.77□□□□□ -0.36
DEFA1P59665 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA1P59665 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA1P59665 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA1P59665 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC12.77□□□□□ -0.36
DEFA1P59665 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
DEFA1P59665 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
DEFA1P59665 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA1P59665 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms