Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.74□□□□□ -0.37
CLDN12P56749 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CLDN12P56749 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN12P56749 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDN12P56749 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CLDN12P56749 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLDN12P56749 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLDN12P56749 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDN12P56749 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLDN12P56749 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDN12P56749 KRT8P35-201ENST00000483942 1338 ntBASIC12.73□□□□□ -0.37
CLDN12P56749 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN12P56749 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDN12P56749 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN12P56749 RPSAP43-201ENST00000402237 625 ntBASIC12.73□□□□□ -0.37
CLDN12P56749 AC092580.3-201ENST00000430932 139 ntBASIC12.73□□□□□ -0.37
CLDN12P56749 CNN2P2-201ENST00000443536 909 ntBASIC12.73□□□□□ -0.37
CLDN12P56749 CNN2P3-201ENST00000450201 906 ntBASIC12.73□□□□□ -0.37
CLDN12P56749 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.73□□□□□ -0.37
CLDN12P56749 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN12P56749 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 SPDYE22P-201ENST00000582158 798 ntBASIC12.73□□□□□ -0.37
CLDN12P56749 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN12P56749 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN12P56749 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDN12P56749 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDN12P56749 AL136317.3-201ENST00000618497 906 ntBASIC12.73□□□□□ -0.37
CLDN12P56749 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDN12P56749 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDN12P56749 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDN12P56749 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDN12P56749 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CLDN12P56749 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 PCDHA6-201ENST00000378126 3267 ntBASIC12.73□□□□□ -0.37
CLDN12P56749 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDN12P56749 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLDN12P56749 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 AC100757.3-201ENST00000622361 1406 ntBASIC12.72□□□□□ -0.37
CLDN12P56749 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDN12P56749 TLE1P1-201ENST00000422965 589 ntBASIC12.72□□□□□ -0.37
CLDN12P56749 KLF2P3-201ENST00000451977 1087 ntBASIC12.72□□□□□ -0.37
CLDN12P56749 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 AC131206.1-201ENST00000538078 1211 ntBASIC12.72□□□□□ -0.37
CLDN12P56749 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLDN12P56749 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 AC093813.1-201ENST00000605066 256 ntBASIC12.72□□□□□ -0.37
CLDN12P56749 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN12P56749 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms