Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.77□□□□□ -0.2
WNT3P56703 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
WNT3P56703 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
WNT3P56703 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
WNT3P56703 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.77□□□□□ -0.2
WNT3P56703 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
WNT3P56703 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
WNT3P56703 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 CNN2P8-201ENST00000421872 913 ntBASIC13.77□□□□□ -0.21
WNT3P56703 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 AC016694.1-201ENST00000434179 700 ntBASIC13.77□□□□□ -0.21
WNT3P56703 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.77□□□□□ -0.21
WNT3P56703 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 KRT90P-201ENST00000549264 1064 ntBASIC13.77□□□□□ -0.21
WNT3P56703 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.77□□□□□ -0.21
WNT3P56703 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.77□□□□□ -0.21
WNT3P56703 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 RN7SL713P-201ENST00000582127 302 ntBASIC13.77□□□□□ -0.21
WNT3P56703 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.77□□□□□ -0.21
WNT3P56703 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 AC008825.2-201ENST00000603374 718 ntBASIC13.77□□□□□ -0.21
WNT3P56703 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 AC027601.3-201ENST00000622907 509 ntBASIC13.77□□□□□ -0.21
WNT3P56703 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 AC006453.4-201ENST00000636949 1252 ntBASIC13.77□□□□□ -0.21
WNT3P56703 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
WNT3P56703 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
WNT3P56703 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
WNT3P56703 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 AC079781.5-202ENST00000641784 3743 ntBASIC13.76□□□□□ -0.21
WNT3P56703 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
WNT3P56703 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
WNT3P56703 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.76□□□□□ -0.21
WNT3P56703 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
WNT3P56703 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.76□□□□□ -0.21
WNT3P56703 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.76□□□□□ -0.21
WNT3P56703 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
WNT3P56703 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
WNT3P56703 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms