Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TNFSF9P41273 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TNFSF9P41273 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TNFSF9P41273 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.68■□□□□ 0.1
TNFSF9P41273 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TNFSF9P41273 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.67■□□□□ 0.1
TNFSF9P41273 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.67■□□□□ 0.1
TNFSF9P41273 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TNFSF9P41273 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 LINC01230-201ENST00000625222 3017 ntBASIC15.67■□□□□ 0.1
TNFSF9P41273 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 RNA5SP359-201ENST00000364838 113 ntBASIC15.67■□□□□ 0.1
TNFSF9P41273 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFSF9P41273 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TNFSF9P41273 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 CHMP4BP1-201ENST00000556017 588 ntBASIC15.67■□□□□ 0.1
TNFSF9P41273 MIR3619-201ENST00000579667 83 ntBASIC15.67■□□□□ 0.1
TNFSF9P41273 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.67■□□□□ 0.1
TNFSF9P41273 AC097724.1-201ENST00000609581 426 ntBASIC15.67■□□□□ 0.1
TNFSF9P41273 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFSF9P41273 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.67■□□□□ 0.1
TNFSF9P41273 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TNFSF9P41273 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TNFSF9P41273 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 AC015909.3-201ENST00000572855 1794 ntBASIC15.67■□□□□ 0.1
TNFSF9P41273 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TNFSF9P41273 AL022313.4-201ENST00000562756 2046 ntBASIC15.67■□□□□ 0.1
TNFSF9P41273 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 AL161772.1-201ENST00000610494 4412 ntBASIC15.66■□□□□ 0.1
TNFSF9P41273 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TNFSF9P41273 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 MYO15B-237ENST00000642007 4893 ntBASIC15.66■□□□□ 0.1
TNFSF9P41273 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TNFSF9P41273 AC239868.1-201ENST00000369385 493 ntBASIC15.66■□□□□ 0.1
TNFSF9P41273 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.66■□□□□ 0.1
TNFSF9P41273 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 PDIA3P2-201ENST00000428073 158 ntBASIC15.66■□□□□ 0.1
TNFSF9P41273 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.66■□□□□ 0.1
TNFSF9P41273 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.66■□□□□ 0.1
TNFSF9P41273 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFSF9P41273 NUP210P1-202ENST00000504322 710 ntBASIC15.66■□□□□ 0.1
TNFSF9P41273 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFSF9P41273 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 AL591471.1-201ENST00000621855 229 ntBASIC15.66■□□□□ 0.1
TNFSF9P41273 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TNFSF9P41273 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFSF9P41273 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TNFSF9P41273 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFSF9P41273 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.66■□□□□ 0.1
TNFSF9P41273 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TNFSF9P41273 AC026748.1-201ENST00000624349 3251 ntBASIC15.65■□□□□ 0.1
TNFSF9P41273 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 FAM45BP-202ENST00000592932 1624 ntBASIC15.65■□□□□ 0.1
TNFSF9P41273 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms