Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.4■□□□□ 0.06
RFC1P35251 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFC1P35251 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.4■□□□□ 0.06
RFC1P35251 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
RFC1P35251 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RFC1P35251 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 HSPA8P5-201ENST00000456928 2069 ntBASIC15.39■□□□□ 0.05
RFC1P35251 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
RFC1P35251 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RFC1P35251 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC1P35251 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.39■□□□□ 0.05
RFC1P35251 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC1P35251 AL035414.1-201ENST00000451327 857 ntBASIC15.39■□□□□ 0.05
RFC1P35251 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC1P35251 AC119751.2-201ENST00000504529 210 ntBASIC15.39■□□□□ 0.05
RFC1P35251 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC1P35251 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC1P35251 HILS1-202ENST00000545329 423 ntBASIC15.39■□□□□ 0.05
RFC1P35251 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC1P35251 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.39■□□□□ 0.05
RFC1P35251 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
RFC1P35251 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC1P35251 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
RFC1P35251 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.39■□□□□ 0.05
RFC1P35251 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.39■□□□□ 0.05
RFC1P35251 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RFC1P35251 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RFC1P35251 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC1P35251 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFC1P35251 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC1P35251 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
RFC1P35251 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 AC009093.10-201ENST00000641956 1442 ntBASIC15.38■□□□□ 0.05
RFC1P35251 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RFC1P35251 CSF2RBP1-201ENST00000447905 391 ntBASIC15.38■□□□□ 0.05
RFC1P35251 AC100850.1-201ENST00000506768 649 ntBASIC15.38■□□□□ 0.05
RFC1P35251 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.38■□□□□ 0.05
RFC1P35251 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.38■□□□□ 0.05
RFC1P35251 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
RFC1P35251 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RFC1P35251 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RFC1P35251 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.38■□□□□ 0.05
RFC1P35251 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RFC1P35251 CICP4-201ENST00000447359 2812 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms