Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.93□□□□□ -0.34
MSR1P21757 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.93□□□□□ -0.34
MSR1P21757 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 AC012617.1-204ENST00000586340 2305 ntBASIC12.93□□□□□ -0.34
MSR1P21757 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
MSR1P21757 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MSR1P21757 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.92□□□□□ -0.34
MSR1P21757 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
MSR1P21757 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
MSR1P21757 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.92□□□□□ -0.34
MSR1P21757 CNN2P10-201ENST00000443067 918 ntBASIC12.92□□□□□ -0.34
MSR1P21757 HOMER2P2-201ENST00000451621 847 ntBASIC12.92□□□□□ -0.34
MSR1P21757 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.92□□□□□ -0.34
MSR1P21757 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.92□□□□□ -0.34
MSR1P21757 KRT17P8-201ENST00000540749 863 ntBASIC12.92□□□□□ -0.34
MSR1P21757 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.92□□□□□ -0.34
MSR1P21757 AC023310.1-201ENST00000554836 735 ntBASIC12.92□□□□□ -0.34
MSR1P21757 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.92□□□□□ -0.34
MSR1P21757 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.92□□□□□ -0.34
MSR1P21757 AL136301.1-201ENST00000615830 422 ntBASIC12.92□□□□□ -0.34
MSR1P21757 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.92□□□□□ -0.34
MSR1P21757 AL162274.1-201ENST00000617191 1098 ntBASIC12.92□□□□□ -0.34
MSR1P21757 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
MSR1P21757 AC027601.3-201ENST00000622907 509 ntBASIC12.92□□□□□ -0.34
MSR1P21757 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.92□□□□□ -0.34
MSR1P21757 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.92□□□□□ -0.34
MSR1P21757 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.92□□□□□ -0.34
MSR1P21757 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
MSR1P21757 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MSR1P21757 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MSR1P21757 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MSR1P21757 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.91□□□□□ -0.34
MSR1P21757 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MSR1P21757 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.91□□□□□ -0.34
MSR1P21757 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.91□□□□□ -0.34
MSR1P21757 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MSR1P21757 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.91□□□□□ -0.34
MSR1P21757 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MSR1P21757 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.91□□□□□ -0.34
MSR1P21757 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.91□□□□□ -0.34
MSR1P21757 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MSR1P21757 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.91□□□□□ -0.34
MSR1P21757 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms