Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC005089.1-201ENST00000619486 2241 ntBASIC12.74□□□□□ -0.37
CCL2P13500 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL2P13500 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL2P13500 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 AC244394.1-201ENST00000435000 1665 ntBASIC12.74□□□□□ -0.37
CCL2P13500 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL2P13500 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.74□□□□□ -0.37
CCL2P13500 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCL2P13500 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CCL2P13500 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.74□□□□□ -0.37
CCL2P13500 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.74□□□□□ -0.37
CCL2P13500 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.74□□□□□ -0.37
CCL2P13500 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.74□□□□□ -0.37
CCL2P13500 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.74□□□□□ -0.37
CCL2P13500 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
CCL2P13500 KLF2P1-201ENST00000447438 1042 ntBASIC12.74□□□□□ -0.37
CCL2P13500 HSPB1P2-201ENST00000448722 546 ntBASIC12.74□□□□□ -0.37
CCL2P13500 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.74□□□□□ -0.37
CCL2P13500 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.74□□□□□ -0.37
CCL2P13500 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.74□□□□□ -0.37
CCL2P13500 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 RN7SL219P-201ENST00000582872 296 ntBASIC12.74□□□□□ -0.37
CCL2P13500 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.74□□□□□ -0.37
CCL2P13500 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CCL2P13500 AC132192.2-201ENST00000596206 1147 ntBASIC12.74□□□□□ -0.37
CCL2P13500 AC009955.4-201ENST00000597192 544 ntBASIC12.74□□□□□ -0.37
CCL2P13500 AC008825.2-201ENST00000603374 718 ntBASIC12.74□□□□□ -0.37
CCL2P13500 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.74□□□□□ -0.37
CCL2P13500 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.74□□□□□ -0.37
CCL2P13500 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCL2P13500 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCL2P13500 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CCL2P13500 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.74□□□□□ -0.37
CCL2P13500 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
CCL2P13500 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL2P13500 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 TUBB1P2-201ENST00000422712 1306 ntBASIC12.73□□□□□ -0.37
CCL2P13500 TUBB1P1-201ENST00000503144 1300 ntBASIC12.73□□□□□ -0.37
CCL2P13500 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCL2P13500 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL2P13500 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 MIR1908-201ENST00000410394 80 ntBASIC12.73□□□□□ -0.37
CCL2P13500 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 AL354877.1-201ENST00000424412 413 ntBASIC12.73□□□□□ -0.37
CCL2P13500 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL2P13500 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 AL035414.1-201ENST00000451327 857 ntBASIC12.73□□□□□ -0.37
CCL2P13500 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 AC021723.1-201ENST00000486306 515 ntBASIC12.73□□□□□ -0.37
CCL2P13500 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL2P13500 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 AC104982.3-201ENST00000581995 514 ntBASIC12.73□□□□□ -0.37
CCL2P13500 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL2P13500 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.73□□□□□ -0.37
CCL2P13500 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.73□□□□□ -0.37
CCL2P13500 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CCL2P13500 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CCL2P13500 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCL2P13500 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CCL2P13500 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CCL2P13500 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms