Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
COL11A1P12107 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COL11A1P12107 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.1■□□□□ 0.17
COL11A1P12107 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.1■□□□□ 0.17
COL11A1P12107 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.1■□□□□ 0.17
COL11A1P12107 AC010234.1-201ENST00000494599 870 ntBASIC16.1■□□□□ 0.17
COL11A1P12107 RN7SKP155-201ENST00000516031 288 ntBASIC16.1■□□□□ 0.17
COL11A1P12107 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COL11A1P12107 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.1■□□□□ 0.17
COL11A1P12107 COQ4-204ENST00000608951 781 ntTSL 2 BASIC16.1■□□□□ 0.17
COL11A1P12107 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 AC002472.4-201ENST00000641915 272 ntBASIC16.1■□□□□ 0.17
COL11A1P12107 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
COL11A1P12107 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL11A1P12107 AC140479.7-201ENST00000636301 2332 ntBASIC16.09■□□□□ 0.17
COL11A1P12107 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COL11A1P12107 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL11A1P12107 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.09■□□□□ 0.17
COL11A1P12107 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.09■□□□□ 0.17
COL11A1P12107 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
COL11A1P12107 AC021305.1-201ENST00000520656 1514 ntBASIC16.09■□□□□ 0.17
COL11A1P12107 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.09■□□□□ 0.17
COL11A1P12107 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.09■□□□□ 0.17
COL11A1P12107 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COL11A1P12107 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 BCAS2P2-201ENST00000425064 674 ntBASIC16.09■□□□□ 0.17
COL11A1P12107 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.09■□□□□ 0.17
COL11A1P12107 ALG1L7P-201ENST00000502317 768 ntBASIC16.09■□□□□ 0.17
COL11A1P12107 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.09■□□□□ 0.17
COL11A1P12107 BAP1-211ENST00000615113 489 ntBASIC16.09■□□□□ 0.17
COL11A1P12107 MIR6746-201ENST00000620971 63 ntBASIC16.09■□□□□ 0.17
COL11A1P12107 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.09■□□□□ 0.17
COL11A1P12107 AC007952.5-201ENST00000572818 1486 ntBASIC16.09■□□□□ 0.17
COL11A1P12107 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.09■□□□□ 0.17
COL11A1P12107 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
COL11A1P12107 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL11A1P12107 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL11A1P12107 AC138761.6-201ENST00000583997 1423 ntBASIC16.08■□□□□ 0.17
COL11A1P12107 AC015802.1-201ENST00000588104 1449 ntBASIC16.08■□□□□ 0.17
COL11A1P12107 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.08■□□□□ 0.17
COL11A1P12107 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
COL11A1P12107 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL11A1P12107 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.08■□□□□ 0.17
COL11A1P12107 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.08■□□□□ 0.17
COL11A1P12107 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.08■□□□□ 0.17
COL11A1P12107 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.08■□□□□ 0.17
COL11A1P12107 AC244197.1-201ENST00000456494 951 ntBASIC16.08■□□□□ 0.17
COL11A1P12107 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL11A1P12107 GOLGA2P8-201ENST00000505201 779 ntBASIC16.08■□□□□ 0.17
COL11A1P12107 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.08■□□□□ 0.17
COL11A1P12107 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.08■□□□□ 0.17
COL11A1P12107 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC16.08■□□□□ 0.17
COL11A1P12107 AL136982.5-201ENST00000605222 294 ntBASIC16.08■□□□□ 0.17
COL11A1P12107 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
COL11A1P12107 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
COL11A1P12107 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
COL11A1P12107 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
COL11A1P12107 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
COL11A1P12107 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 AC022080.1-201ENST00000366255 781 ntBASIC16.08■□□□□ 0.16
COL11A1P12107 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COL11A1P12107 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms