Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMC1P11047 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
LAMC1P11047 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMC1P11047 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMC1P11047 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LAMC1P11047 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LAMC1P11047 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMC1P11047 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LAMC1P11047 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LAMC1P11047 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LAMC1P11047 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 AC093826.1-201ENST00000508655 993 ntBASIC20.03■□□□□ 0.8
LAMC1P11047 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
LAMC1P11047 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 NT5C-204ENST00000578337 582 ntTSL 2 BASIC20.03■□□□□ 0.8
LAMC1P11047 PEBP1P2-201ENST00000603980 558 ntBASIC20.03■□□□□ 0.8
LAMC1P11047 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LAMC1P11047 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
LAMC1P11047 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC20.03■□□□□ 0.8
LAMC1P11047 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC20.03■□□□□ 0.8
LAMC1P11047 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LAMC1P11047 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC20.03■□□□□ 0.8
LAMC1P11047 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 SARS-202ENST00000369923 1882 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 AC073210.1-201ENST00000414799 232 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC20.02■□□□□ 0.8
LAMC1P11047 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LAMC1P11047 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.02■□□□□ 0.8
LAMC1P11047 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.02■□□□□ 0.8
LAMC1P11047 FAM90A21P-201ENST00000510875 1396 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 FAM90A15P-201ENST00000514465 1395 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 FAM90A6P-201ENST00000515148 1394 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 FAM90A16P-201ENST00000526662 1395 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 FAM90A9P-201ENST00000527940 1395 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 FAM90A5P-201ENST00000528738 1395 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 FAM90A14P-201ENST00000530386 1395 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 FAM90A13P-201ENST00000534703 1395 ntBASIC20.02■□□□□ 0.8
LAMC1P11047 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC20.02■□□□□ 0.8
LAMC1P11047 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.02■□□□□ 0.8
LAMC1P11047 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.02■□□□□ 0.8
LAMC1P11047 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC20.02■□□□□ 0.8
LAMC1P11047 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC20.02■□□□□ 0.8
LAMC1P11047 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LAMC1P11047 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LAMC1P11047 AC005089.1-201ENST00000619486 2241 ntBASIC20.02■□□□□ 0.79
LAMC1P11047 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
LAMC1P11047 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LAMC1P11047 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC20.02■□□□□ 0.79
LAMC1P11047 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LAMC1P11047 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LAMC1P11047 HMGA1P1-201ENST00000415560 1062 ntBASIC20.02■□□□□ 0.79
LAMC1P11047 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC20.02■□□□□ 0.79
LAMC1P11047 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC20.02■□□□□ 0.79
LAMC1P11047 AC092573.1-201ENST00000433054 884 ntBASIC20.02■□□□□ 0.79
LAMC1P11047 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.02■□□□□ 0.79
LAMC1P11047 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LAMC1P11047 RNA5SP406-201ENST00000516106 112 ntBASIC20.02■□□□□ 0.79
LAMC1P11047 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
LAMC1P11047 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LAMC1P11047 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LAMC1P11047 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
LAMC1P11047 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC20.02■□□□□ 0.79
LAMC1P11047 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC20.02■□□□□ 0.79
LAMC1P11047 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
LAMC1P11047 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC20.02■□□□□ 0.79
LAMC1P11047 CTBP2P8-201ENST00000422584 1330 ntBASIC20.02■□□□□ 0.79
LAMC1P11047 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms