Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTPRFP10586 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPRFP10586 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPRFP10586 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPRFP10586 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPRFP10586 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPRFP10586 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 U3.5-201ENST00000363448 216 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 HMGA1P1-201ENST00000415560 1062 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPRFP10586 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPRFP10586 RPS18P9-201ENST00000482817 460 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPRFP10586 AC132825.4-202ENST00000578792 434 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPRFP10586 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPRFP10586 MME-218ENST00000625667 363 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPRFP10586 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPRFP10586 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 AC092115.1-201ENST00000566277 1402 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 AL022313.4-201ENST00000562756 2046 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPRFP10586 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 OR7E115P-201ENST00000382617 1024 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 AP000354.1-201ENST00000396982 456 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 AF274858.1-201ENST00000406288 372 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 OR51A9P-201ENST00000422578 911 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 RN7SL375P-201ENST00000492442 298 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPRFP10586 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPRFP10586 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPRFP10586 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPRFP10586 AL591424.3-201ENST00000614278 872 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 AC126755.5-201ENST00000622756 267 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPRFP10586 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 TUBB8P4-201ENST00000511806 1324 ntBASIC16.23■□□□□ 0.19
PTPRFP10586 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTPRFP10586 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPRFP10586 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPRFP10586 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 FGD5P1-202ENST00000614866 2498 ntBASIC16.22■□□□□ 0.19
PTPRFP10586 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTPRFP10586 AP001267.2-201ENST00000532619 2086 ntBASIC16.22■□□□□ 0.19
PTPRFP10586 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PTPRFP10586 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 AL080243.1-201ENST00000423293 1060 ntBASIC16.22■□□□□ 0.19
PTPRFP10586 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPRFP10586 KNOP1P1-201ENST00000542108 989 ntBASIC16.22■□□□□ 0.19
PTPRFP10586 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PTPRFP10586 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPRFP10586 AC090510.3-201ENST00000615831 821 ntBASIC16.22■□□□□ 0.19
PTPRFP10586 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
PTPRFP10586 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
PTPRFP10586 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPRFP10586 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPRFP10586 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.22■□□□□ 0.19
PTPRFP10586 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTPRFP10586 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.22■□□□□ 0.19
PTPRFP10586 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPRFP10586 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPRFP10586 TBC1D27-202ENST00000424239 1573 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 VDAC1P11-201ENST00000458323 852 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 GOLGA2P8-201ENST00000505201 779 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
PTPRFP10586 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPRFP10586 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms