Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HOXC6P09630 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HOXC6P09630 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.26■□□□□ 0.19
HOXC6P09630 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HOXC6P09630 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
HOXC6P09630 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC16.26■□□□□ 0.19
HOXC6P09630 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.25■□□□□ 0.19
HOXC6P09630 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.25■□□□□ 0.19
HOXC6P09630 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HOXC6P09630 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HOXC6P09630 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
HOXC6P09630 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HOXC6P09630 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.25■□□□□ 0.19
HOXC6P09630 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HOXC6P09630 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HOXC6P09630 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HOXC6P09630 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HOXC6P09630 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.25■□□□□ 0.19
HOXC6P09630 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HOXC6P09630 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 AC005586.2-201ENST00000563946 837 ntBASIC16.25■□□□□ 0.19
HOXC6P09630 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.25■□□□□ 0.19
HOXC6P09630 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HOXC6P09630 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.25■□□□□ 0.19
HOXC6P09630 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.25■□□□□ 0.19
HOXC6P09630 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HOXC6P09630 AL672207.1-201ENST00000328462 1570 ntBASIC16.25■□□□□ 0.19
HOXC6P09630 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HOXC6P09630 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HOXC6P09630 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC6P09630 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
HOXC6P09630 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HOXC6P09630 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
HOXC6P09630 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC6P09630 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HOXC6P09630 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC6P09630 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC6P09630 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.24■□□□□ 0.19
HOXC6P09630 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC6P09630 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
HOXC6P09630 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC6P09630 AC095040.1-201ENST00000513286 675 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 RNA5SP406-201ENST00000516106 112 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.24■□□□□ 0.19
HOXC6P09630 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.24■□□□□ 0.19
HOXC6P09630 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC6P09630 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
HOXC6P09630 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms