Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RN7SKP230-201ENST00000365642 335 ntBASIC14.66□□□□□ -0.06
APOA4P06727 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 RPL7P3-201ENST00000441388 714 ntBASIC14.66□□□□□ -0.06
APOA4P06727 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.66□□□□□ -0.06
APOA4P06727 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.66□□□□□ -0.06
APOA4P06727 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.66□□□□□ -0.06
APOA4P06727 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.66□□□□□ -0.06
APOA4P06727 AC106820.3-201ENST00000561653 397 ntBASIC14.66□□□□□ -0.06
APOA4P06727 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.66□□□□□ -0.06
APOA4P06727 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 OR10B1P-201ENST00000601666 907 ntBASIC14.66□□□□□ -0.06
APOA4P06727 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.66□□□□□ -0.06
APOA4P06727 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
APOA4P06727 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 AP000593.2-201ENST00000542775 1433 ntBASIC14.66□□□□□ -0.06
APOA4P06727 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
APOA4P06727 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.66□□□□□ -0.06
APOA4P06727 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
APOA4P06727 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA4P06727 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APOA4P06727 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA4P06727 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APOA4P06727 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
APOA4P06727 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA4P06727 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
APOA4P06727 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
APOA4P06727 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.65□□□□□ -0.06
APOA4P06727 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
APOA4P06727 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA4P06727 AC006001.1-201ENST00000325130 474 ntBASIC14.65□□□□□ -0.06
APOA4P06727 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.65□□□□□ -0.06
APOA4P06727 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.65□□□□□ -0.06
APOA4P06727 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 KLF2P4-201ENST00000451959 1225 ntBASIC14.65□□□□□ -0.06
APOA4P06727 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA4P06727 AL391280.1-201ENST00000506969 1062 ntBASIC14.65□□□□□ -0.06
APOA4P06727 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.65□□□□□ -0.06
APOA4P06727 AP000812.2-201ENST00000538934 718 ntBASIC14.65□□□□□ -0.06
APOA4P06727 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 AC079316.1-201ENST00000548397 411 ntBASIC14.65□□□□□ -0.06
APOA4P06727 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.65□□□□□ -0.06
APOA4P06727 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 DMBT1P1-203ENST00000636837 4628 ntBASIC14.65□□□□□ -0.06
APOA4P06727 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA4P06727 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
APOA4P06727 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 AC015818.8-201ENST00000587907 1519 ntBASIC14.65□□□□□ -0.06
APOA4P06727 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.65□□□□□ -0.06
APOA4P06727 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA4P06727 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms