Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.61□□□□□ -0.39
HLA-DQB1P01920 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AC211486.1-202ENST00000416371 468 ntBASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AC254562.1-201ENST00000417586 456 ntBASIC12.6□□□□□ -0.39
HLA-DQB1P01920 UPF3AP3-201ENST00000420996 769 ntBASIC12.6□□□□□ -0.39
HLA-DQB1P01920 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AC211476.1-201ENST00000503899 468 ntBASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AC026434.2-201ENST00000506094 1078 ntBASIC12.6□□□□□ -0.39
HLA-DQB1P01920 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 SORD2P-201ENST00000558556 1069 ntBASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AC010327.4-202ENST00000591484 748 ntBASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DQB1P01920 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 MSNP1-201ENST00000511640 1732 ntBASIC12.59□□□□□ -0.39
HLA-DQB1P01920 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 AC012531.1-201ENST00000562848 2680 ntBASIC12.59□□□□□ -0.39
HLA-DQB1P01920 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 NUS1P3-201ENST00000423502 862 ntBASIC12.59□□□□□ -0.39
HLA-DQB1P01920 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 AC131206.1-201ENST00000538078 1211 ntBASIC12.59□□□□□ -0.39
HLA-DQB1P01920 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 AC009955.4-201ENST00000597192 544 ntBASIC12.59□□□□□ -0.39
HLA-DQB1P01920 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 AL138828.2-201ENST00000615812 383 ntBASIC12.59□□□□□ -0.39
HLA-DQB1P01920 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 SPDYE12P-201ENST00000618416 771 ntBASIC12.59□□□□□ -0.39
HLA-DQB1P01920 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DQB1P01920 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms