Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.28□□□□□ -0.6
TRBV12-3P01733 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 SORD2P-201ENST00000558556 1069 ntBASIC11.28□□□□□ -0.6
TRBV12-3P01733 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 AC007663.3-201ENST00000609632 465 ntBASIC11.28□□□□□ -0.6
TRBV12-3P01733 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TRBV12-3P01733 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRBV12-3P01733 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRBV12-3P01733 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
TRBV12-3P01733 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRBV12-3P01733 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.27□□□□□ -0.6
TRBV12-3P01733 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.27□□□□□ -0.6
TRBV12-3P01733 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRBV12-3P01733 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
TRBV12-3P01733 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRBV12-3P01733 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.27□□□□□ -0.6
TRBV12-3P01733 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TRBV12-3P01733 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRBV12-3P01733 AC136759.1-202ENST00000530858 2194 ntBASIC11.27□□□□□ -0.6
TRBV12-3P01733 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TRBV12-3P01733 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.27□□□□□ -0.6
TRBV12-3P01733 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.27□□□□□ -0.6
TRBV12-3P01733 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 SMS-201ENST00000379404 1174 ntTSL 3 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.27□□□□□ -0.61
TRBV12-3P01733 RPL18P13-201ENST00000478088 569 ntBASIC11.27□□□□□ -0.61
TRBV12-3P01733 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 AC027237.1-201ENST00000560942 655 ntBASIC11.27□□□□□ -0.61
TRBV12-3P01733 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 AL118558.3-201ENST00000607414 1079 ntBASIC11.27□□□□□ -0.61
TRBV12-3P01733 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.27□□□□□ -0.61
TRBV12-3P01733 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 PCBP2-OT1-201ENST00000634357 590 ntBASIC11.27□□□□□ -0.61
TRBV12-3P01733 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.27□□□□□ -0.61
TRBV12-3P01733 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRBV12-3P01733 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 AC090505.1-201ENST00000430515 1834 ntBASIC11.27□□□□□ -0.61
TRBV12-3P01733 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.27□□□□□ -0.61
TRBV12-3P01733 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms