Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.16■□□□□ 0.02
IFNB1P01574 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.16■□□□□ 0.02
IFNB1P01574 AC012441.1-201ENST00000446669 685 ntBASIC15.16■□□□□ 0.02
IFNB1P01574 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNB1P01574 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.16■□□□□ 0.02
IFNB1P01574 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.16■□□□□ 0.02
IFNB1P01574 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.16■□□□□ 0.02
IFNB1P01574 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.16■□□□□ 0.02
IFNB1P01574 PTP4A1P2-201ENST00000546033 454 ntBASIC15.16■□□□□ 0.02
IFNB1P01574 AC103988.2-201ENST00000561804 725 ntBASIC15.16■□□□□ 0.02
IFNB1P01574 AL096865.1-201ENST00000606796 927 ntBASIC15.16■□□□□ 0.02
IFNB1P01574 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.16■□□□□ 0.02
IFNB1P01574 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNB1P01574 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
IFNB1P01574 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
IFNB1P01574 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.16■□□□□ 0.02
IFNB1P01574 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNB1P01574 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
IFNB1P01574 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
IFNB1P01574 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
IFNB1P01574 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.16■□□□□ 0.02
IFNB1P01574 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
IFNB1P01574 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.15■□□□□ 0.02
IFNB1P01574 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IFNB1P01574 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.15■□□□□ 0.02
IFNB1P01574 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
IFNB1P01574 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IFNB1P01574 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IFNB1P01574 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 DGCR5-201ENST00000399539 862 ntBASIC15.15■□□□□ 0.02
IFNB1P01574 FTLP10-202ENST00000505798 471 ntBASIC15.15■□□□□ 0.02
IFNB1P01574 TDH-203ENST00000531764 1110 ntBASIC15.15■□□□□ 0.02
IFNB1P01574 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.15■□□□□ 0.02
IFNB1P01574 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.15■□□□□ 0.02
IFNB1P01574 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
IFNB1P01574 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
IFNB1P01574 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
IFNB1P01574 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
IFNB1P01574 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
IFNB1P01574 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.14■□□□□ 0.01
IFNB1P01574 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
IFNB1P01574 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNB1P01574 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNB1P01574 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.14■□□□□ 0.01
IFNB1P01574 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.14■□□□□ 0.01
IFNB1P01574 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.14■□□□□ 0.01
IFNB1P01574 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNB1P01574 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.14■□□□□ 0.01
IFNB1P01574 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.14■□□□□ 0.01
IFNB1P01574 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
IFNB1P01574 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
IFNB1P01574 KHSRPP1-201ENST00000427983 1768 ntBASIC15.14■□□□□ 0.01
IFNB1P01574 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
IFNB1P01574 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.14■□□□□ 0.01
IFNB1P01574 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNB1P01574 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
IFNB1P01574 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
IFNB1P01574 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms