Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE6O95741 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.36□□□□□ -0.11
CPNE6O95741 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.36□□□□□ -0.11
CPNE6O95741 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CPNE6O95741 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE6O95741 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CPNE6O95741 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE6O95741 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CPNE6O95741 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CPNE6O95741 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE6O95741 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CPNE6O95741 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CPNE6O95741 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 AC089987.1-201ENST00000551654 2209 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CPNE6O95741 WASH3P-207ENST00000560956 1394 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE6O95741 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE6O95741 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CPNE6O95741 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.35□□□□□ -0.11
CPNE6O95741 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE6O95741 ELK2AP-201ENST00000392510 1007 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE6O95741 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE6O95741 TLE1P1-201ENST00000422965 589 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 AC104073.2-201ENST00000453737 312 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.35□□□□□ -0.11
CPNE6O95741 MARK2P5-201ENST00000507649 634 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.35□□□□□ -0.11
CPNE6O95741 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.35□□□□□ -0.11
CPNE6O95741 AC079328.1-201ENST00000560358 952 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.35□□□□□ -0.11
CPNE6O95741 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.35□□□□□ -0.11
CPNE6O95741 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.35□□□□□ -0.11
CPNE6O95741 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CPNE6O95741 AL805961.1-203ENST00000641078 1258 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 AC068587.8-201ENST00000641239 219 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 MTHFR-210ENST00000641407 2387 ntBASIC14.35□□□□□ -0.11
CPNE6O95741 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CPNE6O95741 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPNE6O95741 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPNE6O95741 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CPNE6O95741 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE6O95741 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE6O95741 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE6O95741 E2F3P2-201ENST00000447755 1422 ntBASIC14.34□□□□□ -0.11
CPNE6O95741 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE6O95741 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE6O95741 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CPNE6O95741 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE6O95741 AC099521.3-201ENST00000624251 2938 ntBASIC14.34□□□□□ -0.11
CPNE6O95741 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.34□□□□□ -0.11
CPNE6O95741 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE6O95741 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms