Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 CLK3P2-201ENST00000427566 1453 ntBASIC13.02□□□□□ -0.33
ALX3O95076 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ALX3O95076 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ALX3O95076 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ALX3O95076 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.02□□□□□ -0.33
ALX3O95076 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.02□□□□□ -0.33
ALX3O95076 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ALX3O95076 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.02□□□□□ -0.33
ALX3O95076 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ALX3O95076 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALX3O95076 AL157414.3-201ENST00000624276 1954 ntBASIC13.01□□□□□ -0.33
ALX3O95076 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ALX3O95076 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.01□□□□□ -0.33
ALX3O95076 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ALX3O95076 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ALX3O95076 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.01□□□□□ -0.33
ALX3O95076 DUX4L47-201ENST00000566374 394 ntBASIC13.01□□□□□ -0.33
ALX3O95076 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.01□□□□□ -0.33
ALX3O95076 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ALX3O95076 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ALX3O95076 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.01□□□□□ -0.33
ALX3O95076 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ALX3O95076 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 AL137783.1-201ENST00000623494 1896 ntBASIC13.01□□□□□ -0.33
ALX3O95076 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 AL354702.1-201ENST00000442006 1960 ntBASIC13.01□□□□□ -0.33
ALX3O95076 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC13.01□□□□□ -0.33
ALX3O95076 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ALX3O95076 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.01□□□□□ -0.33
ALX3O95076 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ALX3O95076 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ALX3O95076 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ALX3O95076 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ALX3O95076 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13□□□□□ -0.33
ALX3O95076 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms