Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RNF40O75150 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF40O75150 MIR3615-201ENST00000581999 87 ntBASIC15.88■□□□□ 0.13
RNF40O75150 AP001542.1-201ENST00000591314 200 ntBASIC15.88■□□□□ 0.13
RNF40O75150 AC093813.1-201ENST00000605066 256 ntBASIC15.88■□□□□ 0.13
RNF40O75150 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF40O75150 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 AC091271.1-201ENST00000611877 1162 ntBASIC15.88■□□□□ 0.13
RNF40O75150 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RNF40O75150 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF40O75150 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF40O75150 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF40O75150 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF40O75150 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF40O75150 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RNF40O75150 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.87■□□□□ 0.13
RNF40O75150 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RNF40O75150 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF40O75150 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 ACKR1-201ENST00000368121 1240 ntBASIC15.87■□□□□ 0.13
RNF40O75150 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 MIR1247-201ENST00000408206 136 ntBASIC15.87■□□□□ 0.13
RNF40O75150 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RNF40O75150 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF40O75150 DUX4L45-201ENST00000566406 1057 ntBASIC15.87■□□□□ 0.13
RNF40O75150 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF40O75150 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.87■□□□□ 0.13
RNF40O75150 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
RNF40O75150 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF40O75150 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF40O75150 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF40O75150 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF40O75150 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF40O75150 HAL-202ENST00000538703 2637 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF40O75150 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF40O75150 AC019294.4-201ENST00000561777 2905 ntBASIC15.86■□□□□ 0.13
RNF40O75150 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF40O75150 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF40O75150 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF40O75150 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RNF40O75150 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF40O75150 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF40O75150 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF40O75150 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF40O75150 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF40O75150 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF40O75150 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF40O75150 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF40O75150 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF40O75150 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
RNF40O75150 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF40O75150 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF40O75150 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF40O75150 ACTG1P22-201ENST00000603793 1099 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms