Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE3O75131 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.1□□□□□ -0.15
CPNE3O75131 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.1□□□□□ -0.15
CPNE3O75131 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE3O75131 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 AC003102.2-201ENST00000589195 1469 ntBASIC14.1□□□□□ -0.15
CPNE3O75131 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE3O75131 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
CPNE3O75131 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE3O75131 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CPNE3O75131 AC004899.1-201ENST00000424687 1714 ntBASIC14.1□□□□□ -0.15
CPNE3O75131 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CPNE3O75131 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 SALL4P5-201ENST00000419001 1760 ntBASIC14.09□□□□□ -0.15
CPNE3O75131 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 E2F3P2-201ENST00000447755 1422 ntBASIC14.09□□□□□ -0.15
CPNE3O75131 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CPNE3O75131 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.09□□□□□ -0.15
CPNE3O75131 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.09□□□□□ -0.15
CPNE3O75131 AC022217.1-201ENST00000521069 738 ntBASIC14.09□□□□□ -0.15
CPNE3O75131 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.09□□□□□ -0.15
CPNE3O75131 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.09□□□□□ -0.15
CPNE3O75131 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.09□□□□□ -0.15
CPNE3O75131 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.09□□□□□ -0.15
CPNE3O75131 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 AC132192.2-201ENST00000596206 1147 ntBASIC14.09□□□□□ -0.15
CPNE3O75131 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.09□□□□□ -0.15
CPNE3O75131 AC106872.11-201ENST00000605838 421 ntBASIC14.09□□□□□ -0.15
CPNE3O75131 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CPNE3O75131 AC100757.4-201ENST00000626934 759 ntBASIC14.09□□□□□ -0.15
CPNE3O75131 AC138627.1-207ENST00000641560 1006 ntBASIC14.09□□□□□ -0.15
CPNE3O75131 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CPNE3O75131 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE3O75131 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE3O75131 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE3O75131 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE3O75131 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE3O75131 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE3O75131 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE3O75131 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE3O75131 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE3O75131 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE3O75131 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE3O75131 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.08□□□□□ -0.15
CPNE3O75131 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.08□□□□□ -0.16
CPNE3O75131 AC023090.2-201ENST00000625182 2110 ntBASIC14.08□□□□□ -0.16
CPNE3O75131 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CPNE3O75131 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms