Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LDB3O75112 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LDB3O75112 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LDB3O75112 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LDB3O75112 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.72□□□□□ -0.21
LDB3O75112 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LDB3O75112 KRT8P29-201ENST00000420409 1371 ntBASIC13.72□□□□□ -0.21
LDB3O75112 MBLAC2-202ENST00000514906 1936 ntBASIC13.72□□□□□ -0.21
LDB3O75112 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LDB3O75112 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LDB3O75112 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.72□□□□□ -0.21
LDB3O75112 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.72□□□□□ -0.21
LDB3O75112 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 POM121L10P-201ENST00000436994 1285 ntBASIC13.72□□□□□ -0.21
LDB3O75112 FAM58BP-201ENST00000439056 645 ntBASIC13.72□□□□□ -0.21
LDB3O75112 AC012441.2-201ENST00000444843 739 ntBASIC13.72□□□□□ -0.21
LDB3O75112 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.72□□□□□ -0.21
LDB3O75112 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.72□□□□□ -0.21
LDB3O75112 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.72□□□□□ -0.21
LDB3O75112 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.72□□□□□ -0.21
LDB3O75112 AC009884.2-201ENST00000603110 324 ntBASIC13.72□□□□□ -0.21
LDB3O75112 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LDB3O75112 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.72□□□□□ -0.21
LDB3O75112 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.72□□□□□ -0.21
LDB3O75112 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.72□□□□□ -0.21
LDB3O75112 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 AC136759.1-202ENST00000530858 2194 ntBASIC13.72□□□□□ -0.21
LDB3O75112 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.72□□□□□ -0.21
LDB3O75112 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LDB3O75112 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LDB3O75112 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
LDB3O75112 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.71□□□□□ -0.21
LDB3O75112 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LDB3O75112 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.71□□□□□ -0.21
LDB3O75112 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.71□□□□□ -0.21
LDB3O75112 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.71□□□□□ -0.21
LDB3O75112 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.71□□□□□ -0.21
LDB3O75112 TUBB8P8-201ENST00000458717 1058 ntBASIC13.71□□□□□ -0.21
LDB3O75112 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.71□□□□□ -0.21
LDB3O75112 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.71□□□□□ -0.21
LDB3O75112 AC092658.1-201ENST00000505836 891 ntBASIC13.71□□□□□ -0.21
LDB3O75112 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.71□□□□□ -0.21
LDB3O75112 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.71□□□□□ -0.21
LDB3O75112 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.71□□□□□ -0.21
LDB3O75112 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.71□□□□□ -0.21
LDB3O75112 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LDB3O75112 MIR4538-201ENST00000581377 78 ntBASIC13.71□□□□□ -0.21
LDB3O75112 AL118558.3-201ENST00000607414 1079 ntBASIC13.71□□□□□ -0.21
LDB3O75112 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
LDB3O75112 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms