Protein–RNA interactions for Protein: O60784

TOM1, Target of Myb protein 1, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1O60784 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.3■□□□□ 0.68
TOM1O60784 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TOM1O60784 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOM1O60784 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOM1O60784 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TOM1O60784 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TOM1O60784 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.3■□□□□ 0.68
TOM1O60784 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOM1O60784 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.3■□□□□ 0.68
TOM1O60784 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TOM1O60784 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.29■□□□□ 0.68
TOM1O60784 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
TOM1O60784 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC19.29■□□□□ 0.68
TOM1O60784 NOS2P3-201ENST00000411468 867 ntBASIC19.29■□□□□ 0.68
TOM1O60784 NOS2P2-201ENST00000426269 867 ntBASIC19.29■□□□□ 0.68
TOM1O60784 FTLP3-201ENST00000427242 528 ntBASIC19.29■□□□□ 0.68
TOM1O60784 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 RN7SL47P-201ENST00000488710 299 ntBASIC19.29■□□□□ 0.68
TOM1O60784 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC19.29■□□□□ 0.68
TOM1O60784 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC19.29■□□□□ 0.68
TOM1O60784 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC19.29■□□□□ 0.68
TOM1O60784 AC127002.1-201ENST00000619123 455 ntBASIC19.29■□□□□ 0.68
TOM1O60784 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC19.29■□□□□ 0.68
TOM1O60784 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC19.29■□□□□ 0.68
TOM1O60784 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC19.29■□□□□ 0.68
TOM1O60784 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
TOM1O60784 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.29■□□□□ 0.68
TOM1O60784 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TOM1O60784 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TOM1O60784 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TOM1O60784 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TOM1O60784 KRT8P38-201ENST00000441370 1430 ntBASIC19.28■□□□□ 0.68
TOM1O60784 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 KLK8-203ENST00000347619 555 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TOM1O60784 CD37-203ENST00000426897 1204 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 AC012513.2-201ENST00000441511 1137 ntBASIC19.28■□□□□ 0.68
TOM1O60784 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC19.28■□□□□ 0.68
TOM1O60784 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 RN7SL148P-201ENST00000467120 279 ntBASIC19.28■□□□□ 0.68
TOM1O60784 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19.28■□□□□ 0.68
TOM1O60784 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC19.28■□□□□ 0.68
TOM1O60784 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC19.28■□□□□ 0.68
TOM1O60784 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.28■□□□□ 0.68
TOM1O60784 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TOM1O60784 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TOM1O60784 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
TOM1O60784 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TOM1O60784 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOM1O60784 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
TOM1O60784 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.27■□□□□ 0.68
TOM1O60784 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC19.27■□□□□ 0.68
TOM1O60784 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.27■□□□□ 0.68
TOM1O60784 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TOM1O60784 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TOM1O60784 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms