Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN5O00501 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN5O00501 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN5O00501 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN5O00501 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN5O00501 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN5O00501 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN5O00501 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN5O00501 CHMP4BP1-201ENST00000556017 588 ntBASIC15.31■□□□□ 0.04
CLDN5O00501 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN5O00501 MIR3619-201ENST00000579667 83 ntBASIC15.31■□□□□ 0.04
CLDN5O00501 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 AC097724.1-201ENST00000609581 426 ntBASIC15.31■□□□□ 0.04
CLDN5O00501 AF254983.2-201ENST00000612331 135 ntBASIC15.31■□□□□ 0.04
CLDN5O00501 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 AC023908.3-201ENST00000564211 3047 ntBASIC15.31■□□□□ 0.04
CLDN5O00501 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN5O00501 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CLDN5O00501 LINC01165-201ENST00000445190 1623 ntBASIC15.31■□□□□ 0.04
CLDN5O00501 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLDN5O00501 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN5O00501 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN5O00501 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CLDN5O00501 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CLDN5O00501 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 AC073150.1-201ENST00000450406 1084 ntBASIC15.3■□□□□ 0.04
CLDN5O00501 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 AP002353.1-201ENST00000528257 1599 ntBASIC15.3■□□□□ 0.04
CLDN5O00501 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN5O00501 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN5O00501 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN5O00501 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN5O00501 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN5O00501 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 AC064801.2-201ENST00000625052 1303 ntBASIC15.3■□□□□ 0.04
CLDN5O00501 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN5O00501 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLDN5O00501 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDN5O00501 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 AC015909.3-201ENST00000572855 1794 ntBASIC15.29■□□□□ 0.04
CLDN5O00501 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CLDN5O00501 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN5O00501 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms