Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DMBT1P1-203ENST00000636837 4628 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AL008718.2-201ENST00000609206 1313 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AC131212.3-201ENST00000624087 4219 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 AL136172.1-201ENST00000598590 1394 ntBASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA3F8WFD2 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AC092506.1-202ENST00000401022 528 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 ACTG1P2-201ENST00000415776 1125 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 ACTG1P11-201ENST00000425411 1125 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AC012441.2-201ENST00000444843 739 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 KLF2P1-201ENST00000447438 1042 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 IMP3P2-201ENST00000489760 475 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 MARK2P5-201ENST00000507649 634 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 CHMP4BP1-201ENST00000556017 588 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AC105129.2-201ENST00000559536 390 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AC008132.1-202ENST00000342005 1389 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 AL157791.1-201ENST00000553667 1699 ntBASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA3F8WFD2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 AC092135.3-201ENST00000624151 1846 ntBASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.3□□□□□ -0.28
NPIPA3F8WFD2 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms