Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 MIR6775-201ENST00000617557 69 ntBASIC12.85□□□□□ -0.35
NPIPB4C9JG80 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NPIPB4C9JG80 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 CCT8L1P-201ENST00000465400 1674 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AC103592.1-201ENST00000394513 664 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 FAM21FP-201ENST00000426241 1131 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AC005034.1-201ENST00000426657 489 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AC022210.1-201ENST00000449856 793 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 PGAM1P5-201ENST00000548011 764 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AC133552.6-201ENST00000613406 534 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AL035252.4-201ENST00000624174 288 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 COX11-210ENST00000639671 696 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 AL157996.1-201ENST00000624684 2299 ntBASIC12.84□□□□□ -0.35
NPIPB4C9JG80 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NPIPB4C9JG80 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NPIPB4C9JG80 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
NPIPB4C9JG80 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
NPIPB4C9JG80 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
NPIPB4C9JG80 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
NPIPB4C9JG80 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms