Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 ABCD1P2-201ENST00000429313 1601 ntBASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 AC026434.2-201ENST00000506094 1078 ntBASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 AL445228.2-201ENST00000605589 952 ntBASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 AC064801.2-201ENST00000625052 1303 ntBASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 PCDHA6-201ENST00000378126 3267 ntBASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 AL022313.4-201ENST00000562756 2046 ntBASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HMGB1P1B2RPK0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 USP17L6P-201ENST00000382470 1197 ntBASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 KRT18P32-201ENST00000424695 1287 ntBASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 FAAHP1-202ENST00000446499 1238 ntBASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 AC040169.1-201ENST00000565382 521 ntBASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 PRSS30P-206ENST00000641773 873 ntBASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 AC115284.2-201ENST00000624646 2054 ntBASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.81□□□□□ -0.04
HMGB1P1B2RPK0 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms