Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 CTBP2P8-201ENST00000422584 1330 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 AL513477.1-201ENST00000602865 2407 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 RN7SL494P-201ENST00000461517 304 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 RPL18AP8-201ENST00000486071 528 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 AC131206.1-201ENST00000538078 1211 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 AC003686.1-201ENST00000550956 1034 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 AC068867.1-201ENST00000559855 150 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 AC006548.2-201ENST00000605217 529 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 AC007250.1-201ENST00000608934 338 ntBASIC14.18□□□□□ -0.14
C4orf47A7E2U8 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.18□□□□□ -0.14
C4orf47A7E2U8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 AL135901.1-201ENST00000451812 333 ntBASIC14.17□□□□□ -0.14
C4orf47A7E2U8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 OR5BD1P-201ENST00000532527 817 ntBASIC14.17□□□□□ -0.14
C4orf47A7E2U8 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 AC027139.1-201ENST00000565286 951 ntBASIC14.17□□□□□ -0.14
C4orf47A7E2U8 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 MIR2392-201ENST00000584881 84 ntBASIC14.17□□□□□ -0.14
C4orf47A7E2U8 AP005264.6-204ENST00000588436 719 ntBASIC14.17□□□□□ -0.14
C4orf47A7E2U8 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms