Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 USP17L6P-201ENST00000382470 1197 ntBASIC17.61■□□□□ 0.41
RGPD3A6NKT7 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 RN7SL677P-201ENST00000466970 319 ntBASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AC136475.7-201ENST00000602949 592 ntBASIC17.61■□□□□ 0.41
RGPD3A6NKT7 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 KRT8P42-201ENST00000405771 1399 ntBASIC17.61■□□□□ 0.41
RGPD3A6NKT7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AC074019.1-201ENST00000428788 1096 ntBASIC17.61■□□□□ 0.41
RGPD3A6NKT7 ACTG1P23-201ENST00000437653 1074 ntBASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AC092865.2-201ENST00000439409 971 ntBASIC17.61■□□□□ 0.41
RGPD3A6NKT7 HNRNPA1P3-201ENST00000440968 551 ntBASIC17.61■□□□□ 0.41
RGPD3A6NKT7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.61■□□□□ 0.41
RGPD3A6NKT7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 AC024075.2-201ENST00000598112 1473 ntBASIC17.6■□□□□ 0.41
RGPD3A6NKT7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 AL354702.1-201ENST00000442006 1960 ntBASIC17.6■□□□□ 0.41
RGPD3A6NKT7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 AC139143.1-201ENST00000441772 1207 ntBASIC17.6■□□□□ 0.41
RGPD3A6NKT7 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 MIR5193-201ENST00000584510 109 ntBASIC17.6■□□□□ 0.41
RGPD3A6NKT7 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 AL139424.3-202ENST00000641619 917 ntBASIC17.6■□□□□ 0.41
RGPD3A6NKT7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RGPD3A6NKT7 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 NOS2P3-201ENST00000411468 867 ntBASIC17.59■□□□□ 0.41
RGPD3A6NKT7 NOS2P2-201ENST00000426269 867 ntBASIC17.59■□□□□ 0.41
RGPD3A6NKT7 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 AC022382.1-201ENST00000602768 336 ntBASIC17.59■□□□□ 0.41
RGPD3A6NKT7 AL078624.1-201ENST00000604004 547 ntBASIC17.59■□□□□ 0.41
RGPD3A6NKT7 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC17.59■□□□□ 0.41
RGPD3A6NKT7 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 DUX4L33-201ENST00000635217 958 ntBASIC17.59■□□□□ 0.41
RGPD3A6NKT7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RGPD3A6NKT7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms