Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 HLA-DMA-203ENST00000395305 777 ntBASIC12.67□□□□□ -0.38
MBD3L3A6NE82 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 RPL18AP3-201ENST00000462885 528 ntBASIC12.67□□□□□ -0.38
MBD3L3A6NE82 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 SIGLEC22P-201ENST00000599104 714 ntBASIC12.67□□□□□ -0.38
MBD3L3A6NE82 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 AC084781.1-201ENST00000613737 656 ntBASIC12.67□□□□□ -0.38
MBD3L3A6NE82 MIR6727-201ENST00000620702 65 ntBASIC12.67□□□□□ -0.38
MBD3L3A6NE82 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MBD3L3A6NE82 AC090505.1-201ENST00000430515 1834 ntBASIC12.67□□□□□ -0.38
MBD3L3A6NE82 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 RN7SL832P-201ENST00000607781 1756 ntBASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AC011498.7-201ENST00000624986 2027 ntBASIC12.66□□□□□ -0.38
MBD3L3A6NE82 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AC006987.1-201ENST00000413610 527 ntBASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AC098934.1-203ENST00000442868 1262 ntBASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 NDUFB10P1-201ENST00000567319 521 ntBASIC12.66□□□□□ -0.38
MBD3L3A6NE82 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AL133467.4-201ENST00000602953 725 ntBASIC12.66□□□□□ -0.38
MBD3L3A6NE82 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 AC025262.2-201ENST00000623975 1056 ntBASIC12.66□□□□□ -0.38
MBD3L3A6NE82 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
MBD3L3A6NE82 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms