Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 AL354702.1-201ENST00000442006 1960 ntBASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 BEND3P1-201ENST00000421591 1944 ntBASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 AC015818.8-201ENST00000587907 1519 ntBASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PPARGC1AQ9UBK2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 SHC1P1-201ENST00000425230 1745 ntBASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 AC100850.1-201ENST00000506768 649 ntBASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 AL136301.1-201ENST00000615830 422 ntBASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 AC009542.2-202ENST00000619004 1067 ntBASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.26■□□□□ 0.03
PPARGC1AQ9UBK2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 AL590440.2-201ENST00000641973 1595 ntBASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 AC103988.2-201ENST00000561804 725 ntBASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms