Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.82□□□□□ -0.2
VAPAQ9P0L0 AL162726.2-201ENST00000438986 1017 ntBASIC13.82□□□□□ -0.2
VAPAQ9P0L0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 SERBP1P5-201ENST00000510079 1181 ntBASIC13.82□□□□□ -0.2
VAPAQ9P0L0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 CTBP2P3-201ENST00000585629 1255 ntBASIC13.82□□□□□ -0.2
VAPAQ9P0L0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 AC145423.3-201ENST00000615987 467 ntBASIC13.82□□□□□ -0.2
VAPAQ9P0L0 AC139530.3-201ENST00000620344 690 ntBASIC13.82□□□□□ -0.2
VAPAQ9P0L0 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 AL365181.3-201ENST00000605886 3222 ntBASIC13.82□□□□□ -0.2
VAPAQ9P0L0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.82□□□□□ -0.2
VAPAQ9P0L0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AP000593.2-201ENST00000542775 1433 ntBASIC13.81□□□□□ -0.2
VAPAQ9P0L0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AC007541.1-201ENST00000570282 1469 ntBASIC13.81□□□□□ -0.2
VAPAQ9P0L0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 RN7SKP175-201ENST00000408472 289 ntBASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AC004945.1-201ENST00000416738 983 ntBASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 NCLP1-201ENST00000445357 1963 ntBASIC13.81□□□□□ -0.2
VAPAQ9P0L0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 AC004241.5-201ENST00000623870 2448 ntBASIC13.81□□□□□ -0.2
VAPAQ9P0L0 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 NUTM2HP-201ENST00000442076 2498 ntBASIC13.81□□□□□ -0.2
VAPAQ9P0L0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VAPAQ9P0L0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms