Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 SNORD3B-2-202ENST00000571722 791 ntBASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AC091271.1-201ENST00000611877 1162 ntBASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AC092299.1-201ENST00000632679 757 ntBASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AC004923.1-202ENST00000642106 209 ntBASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
BLOC1S4Q9NUP1 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 TMEM198B-204ENST00000484016 896 ntBASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 AC108725.1-201ENST00000495472 409 ntBASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BLOC1S4Q9NUP1 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.1■□□□□ 0.17
BLOC1S4Q9NUP1 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms