Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 AC015688.4-201ENST00000580780 1647 ntBASIC12.83□□□□□ -0.36
CDH20Q9HBT6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CDH20Q9HBT6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AL023775.1-201ENST00000454907 1746 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AL354702.1-201ENST00000442006 1960 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC041040.2-201ENST00000622926 2899 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 RPS2P32-201ENST00000439199 892 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 MTX1P1-201ENST00000440904 838 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC244107.1-201ENST00000442033 332 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AL035414.1-201ENST00000451327 857 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC008825.2-201ENST00000603374 718 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AP001002.3-201ENST00000623482 206 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.82□□□□□ -0.36
CDH20Q9HBT6 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDH20Q9HBT6 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms