Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.98□□□□□ -0.33
MMP28Q9H239 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.98□□□□□ -0.33
MMP28Q9H239 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.98□□□□□ -0.33
MMP28Q9H239 AC138649.4-201ENST00000612222 287 ntBASIC12.98□□□□□ -0.33
MMP28Q9H239 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.98□□□□□ -0.33
MMP28Q9H239 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 AP000437.1-201ENST00000624057 2085 ntBASIC12.98□□□□□ -0.33
MMP28Q9H239 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MMP28Q9H239 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MMP28Q9H239 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
MMP28Q9H239 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MMP28Q9H239 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.97□□□□□ -0.33
MMP28Q9H239 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.97□□□□□ -0.33
MMP28Q9H239 PCDHA5-203ENST00000614258 4248 ntBASIC12.97□□□□□ -0.33
MMP28Q9H239 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
MMP28Q9H239 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
MMP28Q9H239 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.97□□□□□ -0.33
MMP28Q9H239 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.97□□□□□ -0.33
MMP28Q9H239 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.97□□□□□ -0.33
MMP28Q9H239 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.97□□□□□ -0.33
MMP28Q9H239 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 AL080243.2-201ENST00000418783 582 ntBASIC12.97□□□□□ -0.33
MMP28Q9H239 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
MMP28Q9H239 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.97□□□□□ -0.33
MMP28Q9H239 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.97□□□□□ -0.33
MMP28Q9H239 SPDYE12P-201ENST00000618416 771 ntBASIC12.97□□□□□ -0.33
MMP28Q9H239 AC073592.8-201ENST00000624126 511 ntBASIC12.97□□□□□ -0.33
MMP28Q9H239 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.97□□□□□ -0.33
MMP28Q9H239 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
MMP28Q9H239 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.97□□□□□ -0.33
MMP28Q9H239 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
MMP28Q9H239 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.97□□□□□ -0.33
MMP28Q9H239 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MMP28Q9H239 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
MMP28Q9H239 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.96□□□□□ -0.33
MMP28Q9H239 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
MMP28Q9H239 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MMP28Q9H239 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
MMP28Q9H239 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MMP28Q9H239 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
MMP28Q9H239 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
MMP28Q9H239 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 AL031719.1-201ENST00000623365 2587 ntBASIC12.96□□□□□ -0.33
MMP28Q9H239 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
MMP28Q9H239 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
MMP28Q9H239 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MMP28Q9H239 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
MMP28Q9H239 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
MMP28Q9H239 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
MMP28Q9H239 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
MMP28Q9H239 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
MMP28Q9H239 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 AZGP1P1-201ENST00000411909 902 ntBASIC12.96□□□□□ -0.33
MMP28Q9H239 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.96□□□□□ -0.33
MMP28Q9H239 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.96□□□□□ -0.33
MMP28Q9H239 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.96□□□□□ -0.33
MMP28Q9H239 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 IGHV3-42-201ENST00000520410 361 ntBASIC12.96□□□□□ -0.33
MMP28Q9H239 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.96□□□□□ -0.33
MMP28Q9H239 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.96□□□□□ -0.33
MMP28Q9H239 AL158211.3-201ENST00000607385 239 ntBASIC12.96□□□□□ -0.33
MMP28Q9H239 AL138828.2-201ENST00000615812 383 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms